Discover tools and best practices for working with infectious disease data
We provide general guidance as well as specific information for pathogen characterisation, socioeconomic data, human biomolecular data, and human clinical and health data.
What can we help you find?
Browse all topics by
Attributing credit
Referencing your sources (citations and recognition of contributions)
Data analysis
Generic workflows for different data types
Data communication
Producing visualisations and reports
Data description
Finding (meta)data standards and documentation
Data sources
Finding and sharing data for related data sources
Ethical, Legal, and Social Issues
Legal and ethical aspects and how to deal with them
Provenance
Tracking data and analysis steps
Quality control
Tools and methods to assess quality
Showcase
Applied examples of handling infectious disease data
National resources
Country specific examples
Tools and resources list
Browse all tools and resources mentioned in IDTk
Training resources list
Browse all training resources mentioned in IDTk
We welcome contributors!
This project would not be possible without the many amazing community contributors. The infectious diseases toolkit is an open community project, and you are welcome to join us!
What's new?
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New page: Knowledge Graph Generator (KGG) - A fully automated workflow for creating disease-specific KGs
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A showcase page was added about an open source workflow, integrating biological databases for FAIR data compliant Knowledge Graphs, in the Showcase section. Discover the page here
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New page: An automated pipeline for analysing brain autoradiography images
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A showcase page was added about an automated pipeline for analysing brain autoradiography images, in the Showcase section. Discover the page here
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New page: Data description of Human clinical health data
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Content was added to the Human clinical health data page in the Data Description section. Discover the page here